The basic scientific problem of paper is explained through historical review of the development of the intelligence services in the independent Republic of Macedonia, structures and directions of reform in this area according to the new phenomena of so-called asymmetric threats. Exploring the current state of the security sector in the country, the paper details the processes specific segments that are engaged in this activity and the need for systemic regulation of this area. In this regard in detail is exposed anti-terror legislation and specialized institutions in charge of combating terrorism. The idea is to inform the international academic and professional public on historical and current aspects of intelligence in the country especially in the fight against terrorism.