The purpose of this report is to outline the hierarchical decomposition of surgical procedures, from surgical steps through tasks and subtasks to tool motions, and highlight implications for surgical training systems. Three common laparoscopic procedures were analysed: cholecystectomy, inguinal hernia repair, and Nissen fundoplication. In laparoscopic training workshops and operating rooms, our observational research included split screen videotaping of both the endoscopic view and our video camera’s view of the primary surgeon. Videotapes were extensively annotated and analysed to yield timelines of each procedure, with component surgical steps, substeps, tasks, and subtasks duration as a function of procedure. The hierarchical decomposition of surgical procedures provides a framework for structuring a systematic approach to training, in the real and simulated environment. An example comparing variations in the fundoplication procedure is presented. Our results also have important implications for the design and assessment of new technology and intelligent tools in endoscopic surgery.